Welcome to ccf_streamlines’s documentation!

Contents:

• User’s Guide
  • Installation
  • What are streamlines?
  • Projecting a volume to 2D
  • Projecting a volume to 3D “slab”
  • Projecting a volume using all the streamlines
  • Projecting a morphology to 3D “slab”
  • Projecting a lower-resolution ISH volume
• Data Files
  • Streamlines
  • View lookups
  • Atlas files (2D)
  • Isocortex metrics
• Glossary
• API Reference
  • Streamline Angle Calculations (ccf_streamlines.angle)
  • Coordinates (ccf_streamlines.coordinates)
  • Datasets (ccf_streamlines.dataset)
  • Linestring 3D (ccf_streamlines.linestring3d)
  • Metrics (ccf_streamlines.metrics)
  • Morphology (ccf_streamlines.morphology)
  • Utility Processing Functions (ccf_streamlines.processing)
  • Streamline Projection (ccf_streamlines.projection)

Indices and tables

• Index

• Module Index

• Search Page