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ccf_streamlines 1.1.4 documentation

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Site Navigation

  • User’s Guide
  • Data Files
  • API Reference

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  • Streamline Angle Calculations ( ccf_streamlines.angle )
    • ccf_streamlines.angle.determine_angle_between_streamline_and_plane
    • ccf_streamlines.angle.find_closest_streamline
    • ccf_streamlines.angle.vector_to_3d_affine_matrix
  • Coordinates ( ccf_streamlines.coordinates )
    • ccf_streamlines.coordinates.coordinates_to_voxels
  • Datasets ( ccf_streamlines.dataset )
    • ccf_streamlines.dataset.upscale_ish_volume
  • Linestring 3D ( ccf_streamlines.linestring3d )
    • ccf_streamlines.linestring3d.LineString3D
  • Metrics ( ccf_streamlines.metrics )
    • ccf_streamlines.metrics.measure_streamline_layer_thicknesses
  • Morphology ( ccf_streamlines.morphology )
    • ccf_streamlines.morphology.transform_swc_to_volume
    • ccf_streamlines.morphology.transform_coordinates_to_volume
    • ccf_streamlines.morphology.find_topological_point_coordinates
    • ccf_streamlines.morphology.load_swc_as_dataframe
  • Utility Processing Functions ( ccf_streamlines.projection )
    • ccf_streamlines.processing.remove_duplicate_voxels_from_paths
  • Streamline Projection ( ccf_streamlines.projection )
    • ccf_streamlines.projection.Isocortex2dProjector
    • ccf_streamlines.projection.Isocortex3dProjector
    • ccf_streamlines.projection.IsocortexEntireProjector
    • ccf_streamlines.projection.IsocortexCoordinateProjector
    • ccf_streamlines.projection.BoundaryFinder

Linestring 3D (ccf_streamlines.linestring3d)#

Linestring 3D#

linestring3d.LineString3D(coords)

" Class for operating on 3D paths

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