ccf_streamlines.projection.BoundaryFinder#

class ccf_streamlines.projection.BoundaryFinder(projected_atlas_file, labels_file, single_hemisphere=True)#

Boundaries of cortical regions from 2D atlas projections

Parameters

  • projected_atlas_file (str) – File path to a NRRD file containing the 2D projection of the atlas labeled consistently with the labels_file.

  • labels_file (str) – File path to a text file containing the region labels.

  • single_hemisphere (bool, default True) – Whether to collapse data into a single hemisphere visualization

__init__(projected_atlas_file, labels_file, single_hemisphere=True)#

Methods

__init__(projected_atlas_file, labels_file)

region_boundaries([region_acronyms, ...])

Get projection coordinates of region boundaries.

region_masks([region_acronyms, hemisphere, ...])